SYNOPSIS

mia-cmeans -i <in-file> -o <out-file> [options]

DESCRIPTION

mia-cmeans This Program reads a histogram from stdin and evaluates a cmeans classification of the intensity values into the given number of classes.

OPTIONS

-i --in-file=(input,required)

input file name containing the histogram

-o --out-file=(output,required)

output file name to store probabilities

-n --nclasses=3

number of classes to partition into

-m --max-iter=100

maximum number of iterations

-e --even-start

start with centers evenly distributed over the histogram

-c --class-centers=

initial class centers

-a --auto

atomatic adaption of variance (experimental)

-t --cut-histo

cut empty histogram at the end

-k --variance=1

variance parameter

--self-test

run self test

Help & Info

-V --verbose=warning

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

info \(hy Low level messages

trace \(hy Function call trace

fail \(hy Report test failures

warning \(hy Warnings

error \(hy Report errors

debug \(hy Debug output

message \(hy Normal messages

fatal \(hy Report only fatal errors

--copyright

print copyright information

-h --help

print this help

-? --usage

print a short help

--version

print the version number and exit

Processing

--threads=-1

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

AUTHOR(s)

Gert Wollny

COPYRIGHT

This software is Copyright (c) 1999\(hy2013 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.