Parse the given sequence file(s) and construct the corresponding index files.
gt seq [option ...] sequence_file [...]
-recreate [yes|no]
recreate index files, even if they exist already (default: no)
-showfasta [yes|no]
show all sequences (in FASTA format) (default: no)
-showseqnum [value]
show sequence with given number (in FASTA format) (default: undefined)
-gc-content [yes|no]
print GC-content (for DNA files) (default: no)
-stat [yes|no]
show sequence statistics (default: no)
-seqlengthdistri [yes|no]
show sequence length distribution (default: no)
-width [value]
set output width for FASTA sequence printing (0 disables formatting) (default: 0)
-o [filename]
redirect output to specified file (default: undefined)
-gzip [yes|no]
write gzip compressed output file (default: no)
-bzip2 [yes|no]
write bzip2 compressed output file (default: no)
-force [yes|no]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit
Report bugs to <[email protected]>.