fastaq_merge (1)

fastaq_merge <infile> <outfile>

Converts multi fasta/q file to single sequence file, preserving original order of sequences

positional arguments:

infile

Name of input file. Can be any of FASTA, FASTQ, GFF3, EMBL, GBK, Phylip

outfile

Name of output file

optional arguments:

-h, --help

show this help message and exit

-n NAME, --name NAME

Name of sequence in output file [union]

fastaq_merge was originally written by Martin Hunt ([email protected])

Wellcome Trust Sanger Institute Copyright © 2013 Wellcome Trust Sanger Institute This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.