SYNOPSIS

geomatch ImagePaths

DESCRIPTION

This tool reads two or more images and tests whether their grid dimensions, pixel sizes, and image-to-space transformations match. Optionally, all images are reoriented into standard orientation before performing the test. If all images match, the tool returns with exit code 0, otherwise it returns with exit code 2. In case of an error (e.g., one of the images can not be read), the exit code is 1.

OPTIONS

Global Toolkit Options (these are shared by all CMTK tools)

--help

Write list of basic command line options to standard output.

--help-all

Write complete list of basic and advanced command line options to standard output.

--wiki

Write list of command line options to standard output in MediaWiki markup.

--man

Write man page source in 'nroff' markup to standard output.

--version

Write toolkit version to standard output.

--echo

Write the current command line to standard output.

--verbose-level <integer>

Set verbosity level.

--verbose, -v

Increment verbosity level by 1 (deprecated; supported for backward compatibility).

--threads <integer>

Set maximum number of parallel threads (for POSIX threads and OpenMP).

Input Options

--read-ras

Read all images in RAS orientation

Image Comparison Options

--no-check-xforms

Do not check transformation matrices.

--no-check-pixels

Do not check pixelsizes.

--tolerance <double>

Numerical tolerance for floating point comparisons of transformation matrices. [Default: 1e-06]

--tolerance-xlate <double>

Numerical tolerance for floating point comparisons of the translational components of the transformation matrices. [Default: 0.001]

AUTHORS

Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

http://www.fsf.org/licensing/licenses/gpl.html

BUGS

Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.