ClusterImageStatistics (1)

Part of ants registration suite

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  4. ClusterImageStatistics: Part of ants registration suite
  1. Carta.tech
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  3. ants
  4. ClusterImageStatistics: Part of ants registration suite

DESCRIPTION

  • Given an ROI and Label Image, find the max and average value in a value image where the value > some user-defined threshold and the cluster size is larger than some min size.

Usage:

ClusterImageStatistics ImageDimension ROIMask.ext LabelImage.ext OutPrefix MinimumClusterSize ValueImageThreshold Image1WithValuesOfInterest.ext ... ImageNWithValuesOfInterest.ext

  • ROIMask.ext -- overall region of interest

LabelImage.ext -- labels for the sub-regions, e.g. Brodmann or just unique labels (see

LabelClustersUniquely )

OutputPrefix -- all output

has this prefix

  • MinimumClusterSize -- the minimum size of clusters of interest

  • ValueImageThreshold -- minimum value of interest

Image*WithValuesOfInterest.ext

--- image(s) that define the values you want to measure