Man Pages in prime-phylo

Section 1: Executable programs or shell commands

chainsaw.1

Cut a gene tree based on a reconciliation

mcmc_analysis.1

Analysis of the mcmc

primeDLRS.1

Guest-in-host tree reconciliation tool

primeDTLSR.1

Guest-in-host tree inference tool

primeGEM.1

Guest-in-host tree reconciliation tool

primeGSRf.1

Guest-in-host tree reconciliation tool

reconcile.1

This program outputs the reconciliation that minimizes the number of duplications

reroot.1

Compute a (new) root for the tree.

showtree.1

View and/or convert phylogenetic trees in the terminal.

tree2leafnames.1

List the leaves of a tree

treesize.1

Count the leaves of trees.