Man Pages in fastx-toolkit

Section 1: Executable programs or shell commands

fasta_clipping_histogram.pl.1

Create a linker clipping information histogram

fasta_formatter.1

Changes the width of sequences line in a fasta file

fasta_nucleotide_changer.1

Convets fasta sequences from/to rna/dna

fastq_masker.1

Masks nucleotides with 'n' (or other character) based on quality

fastq_quality_boxplot_graph.sh.1

Solexa-quality boxplot plotter

fastq_quality_converter.1

Converts sequences based on quality

fastq_quality_filter.1

Filters sequences based on quality

fastq_quality_trimmer.1

Filters sequences based on quality

fastq_to_fasta.1

Convert fastq files to fasta files

fastx_artifacts_filter.1

Fastq/a artifacts filter

fastx_barcode_splitter.pl.1

Fastx barcode splitter

fastx_clipper.1

Fasta/q clipper

fastx_collapser.1

Fasta/q collapser

fastx_nucleotide_distribution_graph.sh.1

Fasta/q nucleotide distribution plotter

fastx_nucleotide_distribution_line_graph.sh.1

Fasta/q nucleotide distribution plotter

fastx_quality_stats.1

Fastx statistics

fastx_renamer.1

Fasta/q renamer

fastx_reverse_complement.1

Fastq/a reverse complement

fastx_trimmer.1

Fasta/q trimmer

fastx_uncollapser.1

Fasta/q uncollapser