xrama1
Shows animated ramachandran plots version 4.0.1
Usage
xrama -f
traj.xtc
-s
topol.tpr
-
[no]
h
-nice
int
-b
time
-e
time
-dt
time
Overview
xrama shows a Ramachandran movie, that is, it shows the Phi/Psi angles as a function of time in an X-Window.
Static Phi/Psi plots for printing can be made with g_rama.
Some of the more common X command line options can be used:
-bg, -fg change colors, -font fontname, changes the font.
Files
-f traj.xtc Input
Trajectory: xtc trr trj gro g96 pdb cpt
-s topol.tpr Input
Run input file: tpr tpb tpa
Options
-[no]hno
Print help info and quit
-nice int 0
Set the nicelevel
-b time 0
First frame (ps) to read from trajectory
-e time 0
Last frame (ps) to read from trajectory
-dt time 0
Only use frame when t MOD dt = first time (ps)
Releases
3 releases since Debian 4.0 (Etch); the text changed 2 times.