vectorstrip1e
Removes vectors from the ends of nucleotide sequence(s)
Usage
vectorstrip -sequence
seqall
-readfile
toggle
-vectorsfile
infile
-mismatch
integer
-besthits
boolean
-alinker
string
-blinker
string
[-allsequences
boolean]
-outfile
outfile
-outseq
seqoutall
vectorstrip -help
Overview
vectorstrip is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Edit" command group(s).
Options
Input section
-
-sequence seqall
Vector input options
-
-readfile toggle -
Default value: Y
-
-vectorsfile infile
Required section
-
-mismatch integer -
Default value: 10
-
-besthits boolean -
Default value: Y
-
-alinker string
-
-blinker string
Output section
-
-allsequences boolean -
Default value: N
-
-outfile outfile
-
-outseq seqoutall
Releases
9 releases since Debian 5.0 (Lenny); the text changed 2 times.
-alinker since Debian 6.0 (Squeeze);
-blinker since Debian 6.0 (Squeeze);
-readfile since Debian 6.0 (Squeeze).
-linkera until Debian 5.0 (Lenny);
-linkerb until Debian 5.0 (Lenny);
-vectorfile until Debian 5.0 (Lenny).