vcfremoveaberrantgenotypes(1)

vcfremoveaberrantgenotypes1

Usage

vcfremoveaberrantgenotypes

Overview

strips samples which are homozygous but have observations implying heterozygosity. Remove samples for which the reported genotype (GT) and observation counts disagree (AO, RO).

Options

Type: transformation

Exit status

0

Success

not 0

Failure

Other

Releases

3 releases since Debian 11 (Bullseye); the text changed 2 times.

  1. 11
  2. 12
  3. 13

License

Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.

Authors

Erik Garrison and vcflib contributors.

From libvcflib-tools 1.0.12+dfsg-1 in Debian 13 (Trixie). Parsed by carta from the page's man source.