vcfannotategenotypes1

Usage

Overview

Examine genotype correspondence. Annotate genotypes in the first file with genotypes in the second adding the genotype as another flag to each sample filed in the first file. annotation-tag is the name of the sample flag which is added to store the annotation. also adds a `has_variant' flag for sites where the second file has a variant.

Options

Type: transformation

Exit status

0

Success

not 0

Failure

Other