vcf2dag1

Usage

Overview

Modify VCF to be able to build a directed acyclic graph (DAG)

Options

options:
    -r, --reference FILE         FASTA reference file.
Modify the VCF file so that homozygous regions are included as REF/. calls.
For each ref and alt allele, assign an index.  These steps are sufficient to
enable use of the VCF as a DAG (specifically a partially-ordered graph).
Type: transformation

Exit status

0

Success

not 0

Failure

Other