transit(1)

transit1

Statistical calculations of essentiality of genes or genomic regions

Usage

python /usr/bin/transit <method>

Overview

For commandline mode, please use one of the known methods (or see documentation to add a new one): Analysis methods:

- example - gumbel - binomial - griffin - hmm - resampling - tn5gaps - rankproduct - utest - GI - anova - zinb - pathway_enrichment - tnseq_stats - corrplot - heatmap

Other functions:

- normalize - convert - export

Releases

Unchanged in 3 releases since Debian 11 (Bullseye).

  1. 11–13

From tnseq-transit 3.3.12-1 in Debian 13 (Trixie). Parsed by carta from the page's man source.