tfscan1e

Identify transcription factor binding sites in dna sequences

Usage

tfscan -sequence seqall -menu list -custom datafile -mismatch integer [-minlength integer] -outfile report

tfscan -help

Overview

tfscan is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Transcription" command group(s).

Options

Input section

-sequence seqall

-menu list: Default value: V

-custom datafile

Required section

-mismatch integer

Additional section

-minlength integer: Default value: 1

Output section

-outfile report

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

5.0
6.0
7–13