subread-fullscan1
Toolkit for processing next-gen sequencing data
Overview
subread-fullscan Version 2.0.4
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This program scans the entire genome to find all high-similarity locations to
a specified read.
Usage:
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./subread-fullscan [options]
-i<index_name> <read_string>
Required arguments:
-
-i <string> -
Base name of the index.
- read_string
-
The read bases.
Optional arguments:
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-m <float> -
The minimum fraction of matched bases in the read, 0.8 by default
Releases
5 releases since Debian 9 (Stretch); the text changed 4 times.
-i since Debian 12 (Bookworm);
-m since Debian 12 (Bookworm).