spdi2tbl(1)

Usage

spdi2tbl

Overview

spdi2tbl reads single nucleotide polymorphism data in NCBI's Sequence-Position-Deletion-Insertion format from standard input and writes a table of adjusted values to standard output.

Releases

2 releases since Debian 12 (Bookworm); the text changed 1 time.

12
13

align-columns(1) align the columns of tab-delimited input efetch(1) retrieve results from an NCBI Entrez search hgvs2spdi(1) transform genomic variation data from HGVS to SPDI format snp2hgvs(1) extract HGVS records from Entrez SNP document summaries snp2tbl(1) present Entrez SNP document summaries in tabular form tbl2prod(1) pair modified mRNA and protein sequences for SNP data transmute(1) transform data, particularly within NCBI Entrez Direct xtract(1) NCBI Entrez Direct XML conversion and transformation tool

Referred to by

efetch(1) retrieve results from an NCBI Entrez search xtract(1) NCBI Entrez Direct XML conversion and transformation tool snp2tbl(1) present Entrez SNP document summaries in tabular form esummary(1) retrieve results from an NCBI Entrez search snp2hgvs(1) extract HGVS records from Entrez SNP document summaries tbl2prod(1) pair modified mRNA and protein sequences for SNP data hgvs2spdi(1) transform genomic variation data from HGVS to SPDI format transmute(1) transform data, particularly within NCBI Entrez Direct efetch.ncbi(1) retrieve results from an NCBI Entrez search align-columns(1) align the columns of tab-delimited input

Usage

Overview

Releases

See also

Referred to by