spades(1) on Linux
The text 103d7913fbad, as Debian 9 (Stretch) shipped it.
SPAdes genome assembler
Flags it lists
-
--12 -
--careful -
--continue -
--cov-cutoff -
--dataset -
--disable-gzip-output -
--disable-rr -
--iontorrent -
--meta -
--nanopore -
--only-assembler -
--only-error-correction -
--pacbio -
--plasmid -
--restart-from -
--rna -
--sanger -
--sc -
--test -
--tmp-dir -
--trusted-contigs -
--untrusted-contigs -
-1 -
-2 -
-k -
-o -
-s