snap-aligner-index(1) on Linux
The text 4e4d03adfd9e, as Debian 12 (Bookworm) shipped it.
scalable nucleotide alignment program
Flags it lists
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-AutoAlt- -
-H -
-altContigFile -
-altContigName -
-altLiftoverFile -
-bSpace -
-bSpace- -
-exact -
-h -
-keysize -
-large -
-locationSize -
-p -
-q -
-qq -
-s -
-sm -
-t