sim_reads(1)

sim_reads1

Convert fastq sequences to fasta sequences.

Usage

sim_reads ref.fa reads.fa

Overview

sim_reads - Simulate sequencing reads from references.

Allowed Options:

--depth arg (=30)

sequencing depth of the sample

--error_rate arg (=0.01)

error rate

--read_length arg (=100)

read length

--paired

if paired-end

--sd arg (=-1)

sd

--insert_distance arg (=500)

insert distance

--print_correct

output correct reads

Releases

Unchanged in 3 releases since Debian 11 (Bullseye).

  1. 11–13

Author

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.

From idba-extra 1.1.3-8 in Debian 13 (Trixie). Parsed by carta from the page's man source.