sigma(1) on Linux
The text c31ce01807d7, as Debian 5.0 (Lenny) shipped it.
Simple greedy multiple alignment of non-coding DNA sequences
Flags it lists
-
--aligned_output -
--bgprobfile -
--bgseqfile -
--caps_only -
--fasta_output -
--help -
--maxfraglength -
--ncorrel -
--significance -
-A -
-B -
-C -
-F -
-b -
-h -
-l -
-n -
-x