showorf1e
Display a nucleotide sequence and translation in pretty format
Usage
showorf -sequence
sequence
-frames
list
[-table
list]
-outfile
outfile
[-ruler
boolean]
[-plabel
boolean]
[-nlabel
boolean]
-width
integer
showorf -help
Overview
showorf is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Gene finding,Nucleic:Translation" command group(s).
Options
Input section
-
-sequence sequence
Required section
-
-frames list -
Default value: 1,2,3,4,5,6
Additional section
-
-table list
Output section
-
-outfile outfile
-
-ruler boolean -
Default value: Y
-
-plabel boolean -
Default value: Y
-
-nlabel boolean -
Default value: Y
-
-width integer -
Default value: 50
Releases
9 releases since Debian 5.0 (Lenny); the text changed 2 times.