seqan_tcoffee(1) on Linux
The text a51427c28df7, as Debian 9 (Stretch) shipped it.
Multiple sequence alignment SYNOPSIS DESCRIPTION OPTIONS -h, --help --version-check BOOL --version -s, --seq INPUT_FILE -a, --alphabet STRING -o, --outfile OUTPUT_FILE -m, --method List of STRING's -l, --libraries List of INPUT_FILE's -pa, --pairwise-alignment STRING -bw, --band-width INTEGER -g, --gop INTEGER -e, --gex INTEGER -ma, --matrix STRING -ms, --msc INTEGER -mm, --mmsc INTEGER -u, --usetree STRING -b, --build STRING -i, --infile INPUT_FILE VERSION