segemehl(1) on Linux
The text 716202dc65a5, as Debian 13 (Trixie), Debian 12 (Bookworm), Debian 11 (Bullseye), Debian 10 (Buster) shipped it. The page shows this text now.
Heuristic mapping of short sequences
Flags it lists
-
--MEOP -
--accuracy -
--bamabafixoida -
--bisulfite -
--briefcigar -
--checkidx -
--differences -
--dropoff -
--evalue -
--extensionpenalty -
--filebins -
--generate -
--generate2 -
--hitstrategy -
--index -
--index2 -
--jump -
--mate -
--maxinterval -
--maxout -
--maxpairinsertsize -
--maxsplitevalue -
--minfraglen -
--minfragscore -
--minsize -
--minsplicecover -
--nohead -
--nomatchfilename -
--order -
--outfile -
--progressbar -
--query -
--readgroupfile -
--readgroupid -
--showalign -
--skipidcheck -
--splicescorescale -
--splits -
--threads -
-A -
-B -
-D -
-E -
-F -
-G -
-H -
-I -
-J -
-M -
-O -
-S -
-U -
-V -
-W -
-X -
-Z -
-b -
-c -
-e -
-g -
-i -
-j -
-l -
-m -
-n -
-o -
-p -
-q -
-r -
-s -
-t -
-u -
-w -
-x -
-y