run_tipp_tool.py1
Helper tool to convert a classification file into a profile
Overview
usage: run_tipp_tool.py [-h] [-g GENE] -a ACTION [-o OUTPUT] [-p PREFIX]
-
[-i INPUT] [-t THRESHOLD]
Performs various tools for TIPP.
optional arguments:
-
-h, --help -
show this help message and exit
-
-g GENE, --gene GENE -
use GENE's reference package
-
-a ACTION, --action ACTION -
Run ACTION
-
-o OUTPUT, --output OUTPUT -
OUTPUT directory
-
-p PREFIX, --prefix PREFIX -
PREFIX
-
-i INPUT, --input INPUT -
INPUT destination
-
-t THRESHOLD, --threshold THRESHOLD -
threshold for classification
-
[-i INPUT] [-t THRESHOLD]