reapr-perfectmap1
Make perfect uniquely mapping plot files
Usage
reapr perfectmap
<assembly.fa>
<reads_1.fastq>
<reads_2.fastq>
<avginsertsize>
<outprefix>
Overview
Note: the reads can be gzipped. If the extension is '.gz', then they are assumed to be gzipped and dealt with accordingly (i.e. called something like <reads_1.fastq.gz> <reads_2.fastq.gz>).
Important
all reads must be the same length.
Releases
5 releases since Debian 9 (Stretch); the text changed 4 times.