reapr-gapresize(1)

reapr-gapresize1

Calculates gap sizes based on read mapping

Usage

reapr gapresize [options] <assembly.fasta> <in.bam> <avg-fragment-length> <max-fragment-length> <outfileprefix>

Options

-g <int>

Only consider gaps of at least this length [1]

Releases

5 releases since Debian 9 (Stretch); the text changed 4 times.

  1. 9
  2. 10
  3. 11
  4. 12
  5. 13

From reapr 1.0.18+dfsg-7 in Debian 13 (Trixie). Parsed by carta from the page's man source.