plast(1) on Linux

Flags it lists

• -E
• -F
• -G
• -M
• -W
• -X
• -Z
• -a
• -alignment-progress
• -b
• -bargraph
• -bargraph-size
• -complete-subject-database-stats-file
• -d
• -e
• -factory-dispatcher
• -factory-gap-result
• -factory-hit-composition
• -factory-hit-fullgap
• -factory-hit-smallgap
• -factory-hit-ungap
• -factory-indexation
• -factory-statistics
• -factory-ungap-result
• -force-query-order
• -full-stats
• -g
• -h
• -i
• -index-threshold
• -max-database-size
• -max-hit-per-query
• -max-hsp-per-hit
• -n
• -o
• -optim-codon-stop
• -optim-filter-ungap
• -outfmt
• -p
• -plastrc
• -progression-file
• -q
• -r
• -resources-progress
• -s
• -seeds-index-filter
• -seeds-use-ratio
• -splitter
• -stats
• -stats-auto
• -stats-fmt
• -strand
• -strands-list
• -verbose
• -xdrop-ungap
• -xmlfilter