pepwindowall1e

Draw kyte-doolittle hydropathy plot for a protein alignment

Usage

pepwindowall -sequences seqset [-datafile datafile] [-length integer] [-normalize boolean] -graph xygraph

pepwindowall -help

Overview

pepwindowall is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Properties" command group(s).

Options

Input section

-sequences seqset: File containing a sequence alignment

-datafile datafile: Default value: Enakai.dat

Additional section

-length integer: Default value: 19

-normalize boolean: Default value: N

Output section

-graph xygraph

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

5.0
6.0
7–13

-normalize since Debian 6.0 (Squeeze).