pepinfo1e
Plot amino acid properties of a protein sequence in parallel.
Usage
pepinfo -sequence
sequence
[-aaproperties
datafile]
[-aahydropathy
datafile]
[-hwindow
integer]
-graph
xygraph
-outfile
outfile
-generalplot
boolean
-hydropathyplot
boolean
pepinfo -help
Overview
pepinfo is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Composition,Protein:Properties,Display" command group(s).
Options
Input section
-
-sequence sequence
-
-aaproperties datafile -
Default value: Eaa_properties.dat
-
-aahydropathy datafile -
Default value: Eaa_hydropathy.dat
Additional section
-
-hwindow integer -
Default value: 9
Output section
-
-graph xygraph
-
-outfile outfile
-
-generalplot boolean -
Default value: Y
-
-hydropathyplot boolean -
Default value: Y
Releases
9 releases since Debian 5.0 (Lenny); the text changed 2 times.