partit2bed.pl1
Converts the output of the chip-seq partitioning program to bed format
Overview
|
partit2bed.pl [options] <ChIP-Part out file> |
|
|
where options are: |
|
|
Show this stuff |
-
--db <path> -
Use <path> to locate Chrom Id Storable File 'chro_idx.nstorage'
|
BED track name [def: Test-BED] |
|---|---|
|
Description field of the BED header line [def: ChIP-Seq] |
-
-n <int> -
Chromosome number (BED declaration lines) [def: 0 - all chromosomes]
-
-b <int> -
Chromosome start [def:
-1- entire chrom region]
-
-e <int> -
Chromosome end [def:
-1- entire chrom region]
-
The program converts the output of the ChIP-Seq partitioning program to BED format.
Releases
Unchanged in 3 releases since Debian 11 (Bullseye).