palindrome1e
Finds inverted repeats in nucleotide sequence(s)
Usage
palindrome -sequence
seqall
-minpallen
integer
-maxpallen
integer
-gaplimit
integer
-nummismatches
integer
-outfile
outfile
-overlap
boolean
palindrome -help
Overview
palindrome is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Repeats" command group(s).
Options
Input section
-
-sequence seqall
Required section
-
-minpallen integer -
Default value: 10
-
-maxpallen integer -
Default value: 100
-
-gaplimit integer -
Default value: 100
-
-nummismatches integer
Output section
-
-outfile outfile
-
-overlap boolean -
Default value: Y
Releases
9 releases since Debian 5.0 (Lenny); the text changed 2 times.