ontocount1e
Count ontology term(s)
Usage
ontocount -oboterms
obo
-subclasses
boolean
-obsolete
boolean
-outfile
outfile
ontocount -help
Overview
ontocount is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology" command group(s).
Options
Input section
-
-oboterms obo
Additional section
Advanced section
-
-subclasses boolean -
Extend the query matches to include all terms which are specialisations (sub-classes) of the matched terms. Default value: N
-
-obsolete boolean -
The default behaviour is to not use or return obsolete terms. This option if set will include all terms. Default value: N
Output section
-
-outfile outfile -
Default value: stdout
Releases
Unchanged in 7 releases since Debian 7 (Wheezy).