octanol1e
Draw a white-wimley protein hydropathy plot
Usage
octanol -sequence
sequence
[-datafile
datafile]
[-width
integer]
-graph
xygraph
[-plotoctanol
boolean]
[-plotinterface
boolean]
[-plotdifference
boolean]
octanol -help
Overview
octanol is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Properties" command group(s).
Options
Input section
-
-sequence sequence
-
-datafile datafile -
Default value: Ewhite-wimley.dat
Additional section
-
-width integer -
Default value: 19
Output section
-
-graph xygraph
-
-plotoctanol boolean -
Default value: N
-
-plotinterface boolean -
Default value: N
-
-plotdifference boolean -
Default value: Y
Releases
9 releases since Debian 5.0 (Lenny); the text changed 2 times.
-plotdifference since Debian 6.0 (Squeeze);
-plotinterface since Debian 6.0 (Squeeze);
-plotoctanol since Debian 6.0 (Squeeze).
-differenceplot until Debian 5.0 (Lenny);
-interfaceplot until Debian 5.0 (Lenny);
-octanolplot until Debian 5.0 (Lenny).