octanol(1e)

octanol1e

Draw a white-wimley protein hydropathy plot

Usage

octanol -sequence sequence [-datafile datafile] [-width integer] -graph xygraph [-plotoctanol boolean] [-plotinterface boolean] [-plotdifference boolean]

octanol -help

Overview

octanol is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Properties" command group(s).

Options

Input section

-sequence sequence
-datafile datafile

Default value: Ewhite-wimley.dat

Additional section

-width integer

Default value: 19

Output section

-graph xygraph
-plotoctanol boolean

Default value: N

-plotinterface boolean

Default value: N

-plotdifference boolean

Default value: Y

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

  1. 5.0
  2. 6.0
  3. 7–13

-plotdifference since Debian 6.0 (Squeeze); -plotinterface since Debian 6.0 (Squeeze); -plotoctanol since Debian 6.0 (Squeeze).

-differenceplot until Debian 5.0 (Lenny); -interfaceplot until Debian 5.0 (Lenny); -octanolplot until Debian 5.0 (Lenny).

Bugs

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Author

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

From emboss 6.6.0+dfsg-15 in Debian 13 (Trixie). Parsed by carta from the page's man source.