nthll1

Usage

Overview

Estimates distinct number of k-mers in FILE(S).

Acceptable file formats: fastq, fasta, sam, bam and in compressed formats gz, bz, zip, xz. Accepts a list of files by adding @ at the beginning of the list name.

Options:

-t, --threads=N

use N parallel threads [1] (N>=2 should be used when input files are >=2)

-k, --kmer=N

the length of kmer [64]

--help

display this help and exit

--version output version information and exit