nifti2dicom(1)

nifti2dicom1

Convert 3d medical images to dicom 2d series

Overview

Nifti2Dicom is a conversion tool that converts 3D NIfTI files (and other formats supported by ITK) to DICOM. Unlike other conversion tools, it can import a DICOM file that is used to import the patient and study DICOM tags, and allows you to edit the accession number and other DICOM tags, in order to create a valid DICOM that can be imported in a PACS.

USAGE:

nifti2dicom

[-# <int>] [-s

<string>] [-p <string>] -o <string> [-r] -i <string> [--acquisitiontime <AAAAMMGG>] [--acquisitiondate <AAAAMMGG>] [--acquisitionnumber <string>] [--useoriginalseries] [--seriestime <AAAAMMGG>] [--seriesdate <AAAAMMGG>] [--seriesdescription <string>] [--seriesnumber <string>] [--seriesinstanceuid <string>] [--donotuseoriginalstudy] [--studytime <hhmmss>] [--studydate <YYYYMMDD>] [--studydescription <string>] [--studyid <string>] [--studyinstanceuid <string>] [--patientweight <WW>] [--patientage <###Y/M>] [--patientsex <M|F|O>] [--patientdob <AAAAMMGG>] [--patientid <string>] [--patientname <COGNOME NOME>] [--referringphysiciansname <string>] [--institutionname <string>] [--manufacturersmodelname <string>] [--manufacturer <string>] [--protocolname <string>] [--softwareversion <string>] [--imagetype <string>] [--modality <string>] [--sopclassuid <string>] [-d <string>] [-y] [-a <string>] [--] [--version] [-h]

Where:

-# <int>, --digits <int>

Number of digits in dicom file names

-s <string>, --suffix <string>

Suffix of dicom file names

-p <string>, --prefix <string>

Prefix of dicom file names

-o <string>, --outputdirectory <string>

(required)

Output dicom directory

-r, --rescale

Rescale image before exporting

-i <string>, --inputfile <string>

(required)

Input NIFTI 1 file

--acquisitiontime <AAAAMMGG>

(0008,0032) Acquisition Time

--acquisitiondate <AAAAMMGG>

(0008,0022) Acquisition Date

--acquisitionnumber <string>

(0020,0012) Acquisition Number

--useoriginalseries

Use original series

--seriestime <AAAAMMGG>

(0008,0031) Series Time

--seriesdate <AAAAMMGG>

(0008,0021) Series Date

--seriesdescription <string>

(0008,103e) Series Description

--seriesnumber <string>

(0020,0011) Series Number

--seriesinstanceuid <string>

(0020,000e) Series Instance UID

--donotuseoriginalstudy

Do not use original study

--studytime <hhmmss>

(0008,0030) Study Time

--studydate <YYYYMMDD>

(0008,0020) Study Date

--studydescription <string>

(0008,1030) Study Description

--studyid <string>

(0020,0010) Study ID

--studyinstanceuid <string>

(0020,000d) Study Instance UID

--patientweight <WW>

(0010,1030) Patient Weight

--patientage <###Y/M>

(0010,1010) Patient Age

--patientsex <M|F|O>

(0010,0040) Patient Sex

--patientdob <AAAAMMGG>

(0010,0030) Patient Date of Birth

--patientid <string>

(0010,0020) Patient ID

--patientname <COGNOME NOME>

(0010,0010) Patient Name

--referringphysiciansname <string>

(0008,0090) Referring Physician's Name

--institutionname <string>

(0008,0080) Institution Name

--manufacturersmodelname <string>

(0008,1090) Manufacturer's Model Name

--manufacturer <string>

(0008,0070) Manufacturer

--protocolname <string>

(0018,1030) Protocol Name

--softwareversion <string>

(0018,1020) Software Version(s)

--imagetype <string>

(0008,0008) Image Type

--modality <string>

(0008,0060) Modality

--sopclassuid <string>

(0008,0016) SOP Class UID

-d <string>, --dicomheaderfile <string>

File containing DICOM header to import

-y, --yes

Do not prompt for Accession Number Warning

-a <string>, --accessionnumber <string>

(0008,0050) Accession Number

--, --ignore_rest

Ignores the rest of the labeled arguments following this flag.

--version

Displays version information and exits.

-h, --help

Displays usage information and exits.

Converts NIfTI1 images to DICOM

Releases

Unchanged in 4 releases since Debian 8 (Jessie).

  1. 8–11

Authors

Nifti2Dicom was primarily written by Daniele E. Domenichelli and Gabriele Arnulfo.

From nifti2dicom-data 0.4.11-3 in Debian 11 (Bullseye). Parsed by carta from the page's man source.