newseq(1e)

newseq1e

Create a sequence file from a typed-in sequence

Usage

newseq -name string -description string -type list -sequence string -outseq seqout

newseq -help

Overview

newseq is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Edit" command group(s).

Options

Input section

-name string

The name of of the sequence should be a single word that you will use to identify the sequence. It should have no (or few) punctuation characters in it.

-description string

Enter any description of the sequence that you require.

-type list

Default value: N

-sequence string

The sequence itself. Because of the limitation of the operating system, you will only be able to type in a short sequence of (typically) 250 characters, or so. The keyboard will beep at you when you have reached this limit and you will not be able to press the RETURN/ENTER key until you have deleted a few characters.

Output section

-outseq seqout

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

  1. 5.0
  2. 6.0
  3. 7–13

Bugs

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Author

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

From emboss 6.6.0+dfsg-15 in Debian 13 (Trixie). Parsed by carta from the page's man source.