mia-2dmyoseries-dice1
Evaluate the dice index between segmentations.
Usage
mia-2dmyoseries-dice -i
<input>
[options]
Overview
mia-2dmyoseries-dice This program is used to evaluate the per-frame dice index of segmented regions of an image with respect to the segmentation of a reference frame from the same series.
Options
-i --input=(required, input); string
|
original segmentation set |
|---|---|
-k --skip=2
|
images to skip atthe bgin of the series |
-r --reference=20
|
reference image |
Help & Info
- -V --verbose=warning
-
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
trace ‐ Function call trace
debug ‐ Debug output
info ‐ Low level messages
message ‐ Normal messages
warning ‐ Warnings
fail ‐ Report test failures
error ‐ Report errors
fatal ‐ Report only fatal errors
-
--copyright -
print copyright information
-
-h --help -
print this help
-
-? --usage -
print a short help
-
--version -
print the version number and exit
Processing
-
--threads=-1 -
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
Examples
Evaluate the dice index of segmentation set segment.set with reference 30 and skipping the first two frames.
mia-2dmyoseries-dice -i segment.set -r 30 -k 2
AUTHOR(s)
Gert Wollny
Releases
5 releases since Debian 8 (Jessie); the text changed 4 times.