mctree-mean-lengths1

Compute the mean lengths for branches in the given topology.

Usage

tree-mean-lengths tree-file < in-file

Compute the mean lengths for branches in the given topology.

`-h, –help`	produce help message
`–tree arg`	tree to re-root
`-s arg (=0), –skip arg (=0)`	number of tree samples to skip
`-u arg, –until arg`	Read until this number of trees.
`–prune arg`	Comma-separated taxa to remove
`-x arg (=1), –subsample arg (=1)`	factor by which to subsample
`–var`	report standard deviation of branch lengths instead of mean
`–no-node-lengths`	ignore branches not in the specified topology
`–safe`	Don’t die if no trees match the topology
`–drop-partial`	Remove partial branches
`–seed arg`	random seed
`-V, –verbose`	Output more log messages on stderr.

BAli-Phy online help: ⟨http://www.bali-phy.org/docs.php⟩\c .

Please send bug reports to ⟨[email protected]⟩\c .

4 releases since Debian 10 (Buster); the text changed 2 times.