carta

mauveAlignment2anchors.pl(1) on Linux

The text 4b5c55ae3b2c, as Debian 10 (Buster) shipped it.

converts a Mauve alignment into Murasaki anchor format based on gapped alignment data (each gap triggers a new anchor). Note this refers to the Mauve alignment format, not the LAGAN .alignment file that Mauve also outputs.

mauveAlignment2anchors.pl(1) on Linux now