last-pair-probs(1) on Linux
The text f0acabb3bc7e, as Debian 8 (Jessie) shipped it.
Read alignments of paired DNA reads to a genome
Flags it lists
-
--circular -
--disjoint -
--estdist -
--fraglen -
--help -
--mismap -
--rna -
--sdev -
-c -
-d -
-e -
-f -
-h -
-m -
-r -
-s