kma(1) on Linux
The text a98319861f0c, as Debian 13 (Trixie), Debian 12 (Bookworm) shipped it. The page shows this text now.
maps and/or aligns raw reads to a template database
Flags it lists
-
-1t1 -
-3p -
-5p -
-ConClave -
-ID -
-Mt1 -
-Npenalty -
-Sparse -
-a -
-and -
-apm -
-bc -
-bcNano -
-bcd -
-bcg -
-boot -
-c -
-ca -
-cge -
-ck -
-deCon -
-dense -
-ef -
-eq -
-ex_mode -
-fpm -
-gapextend -
-gapopen -
-h -
-hmm -
-i -
-int -
-ipe -
-k -
-matrix -
-mem_mode -
-mint2 -
-mint3 -
-ml -
-mmap -
-mp -
-mq -
-mrc -
-mrs -
-nc -
-nf -
-o -
-oa -
-p -
-penalty -
-per -
-pm -
-proxi -
-ref_fsa -
-reward -
-sam -
-sasm -
-shm -
-ss -
-ssa -
-status -
-t -
-t_db -
-tmp -
-transition -
-transversion -
-ts -
-v -
-vcf -
-verbose -
-xl