kma(1) on Linux
The text 0bdb5cfd8cf8, as Debian 11 (Bullseye) shipped it.
mapps raw reads to a template database
Flags it lists
-
-1t1 -
-5p -
-ConClave -
-ID -
-Mt1 -
-Sparse -
-a -
-and -
-apm -
-bc -
-bc90 -
-bcNano -
-boot -
-ca -
-cge -
-ck -
-deCon -
-dense -
-e -
-ef -
-ex_mode -
-fpm -
-gapextend -
-gapopen -
-h -
-i -
-int -
-ipe -
-k -
-matrix -
-mem_mode -
-mp -
-mq -
-mrs -
-o -
-penalty -
-per -
-pm -
-ref_fsa -
-reward -
-shm -
-ss -
-swap -
-t -
-t_db -
-v -
-vcf