iqtree(1) on Linux
The text 803adae2a8c4, as Debian 9 (Stretch) shipped it.
efficient phylogenetic software by maximum likelihood
Flags it lists
-
--no-outfiles -
--opt-gamma-inv -
-? -
-a -
-abayes -
-allnni -
-alrt -
-amin -
-au -
-b -
-bb -
-bc -
-bcor -
-beps -
-bi -
-blfix -
-blmax -
-blmin -
-blscale -
-bo -
-cmax -
-cmin -
-con -
-cptime -
-fconst -
-fmax -
-fs -
-ft -
-gmedian -
-h -
-i -
-keep-ident -
-lbp -
-lmap -
-m -
-madd -
-mdef -
-me -
-mem -
-mfreq -
-mh -
-minsup -
-mrate -
-mredo -
-mset -
-msub -
-mtree -
-mwopt -
-n -
-nbest -
-net -
-ninit -
-nm -
-nstop -
-ntop -
-o -
-pers -
-pre -
-q -
-quiet -
-r -
-rbal -
-rcat -
-rcluster -
-rcsg -
-redo -
-rf -
-rf_adj -
-rf_all -
-ru -
-s -
-safe -
-seed -
-sprrad -
-st -
-sup -
-suptag -
-t -
-v -
-vv -
-vvv -
-wbt -
-wbtl -
-wpl -
-wql -
-wsl -
-wslm -
-wslmr -
-wslr -
-wspm -
-wspmr -
-wspr -
-wsr -
-wt -
-z -
-zb -
-zw