hmm2index(1)

hmm2index1

Usage

hmm2index [options] database

Overview

hmm2index is a utility that creates a binary SSI ("squid sequence index" format) index for an HMM database file called database. The new index file is named database.ssi. An SSI index file is required for hmm2fetch to work, and also for the PVM implementation of hmm2pfam.

Options

-h

Print brief help; includes version number and summary of all options, including expert options.

Releases

Unchanged in 6 releases since Debian 8 (Jessie).

  1. 8–13

Author

Sean Eddy
HHMI/Dept. of Genetics
Washington Univ. School of Medicine
4566 Scott Ave.
St Louis, MO 63110 USA
http://www.genetics.wustl.edu/eddy/

From hmmer2 2.3.2+dfsg-12+b2 in Debian 13 (Trixie). Parsed by carta from the page's man source.