hisat2-build(1) on Linux
The text c0090387790e, as Debian 12 (Bookworm) shipped it.
HISAT2 indexer, wrapper script
Flags it lists
-
--bmax -
--bmaxdivn -
--dcv -
--exon -
--haplotype -
--large-index -
--localftabchars -
--localoffrate -
--nodc -
--repeat-haplotype -
--repeat-info -
--repeat-ref -
--repeat-snp -
--seed -
--snp -
--ss -
--usage -
--version -
-c -
-p