helixturnhelix(1e)

helixturnhelix1e

Identify nucleic acid-binding motifs in protein sequences

Usage

helixturnhelix -sequence seqall [-mean float] [-sd float] [-minsd float] [-eightyseven boolean] -outfile report

helixturnhelix -help

Overview

helixturnhelix is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:2D Structure,Protein:Domains" command group(s).

Options

Input section

-sequence seqall

Additional section

-mean float

Default value: 238.71

-sd float

Default value: 293.61

-minsd float

Default value: 2.5

-eightyseven boolean

Output section

-outfile report

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

  1. 5.0
  2. 6.0
  3. 7–13

Bugs

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Author

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

From emboss 6.6.0+dfsg-15 in Debian 13 (Trixie). Parsed by carta from the page's man source.