gthsplit1
Split genomethreader output files
Usage
gthsplit {-alignmentscore | -coverage
[option ...]
[file ...]}
Overview
Split GenomeThreader output files containing intermediate results.
Options
-
-alignmentscore -
split according to the overall alignment score (scr) default: no
-
-coverage -
split according to coverage (cov) default: no
-
-range -
set the percentage range used to create the sets default: 5
-
-minalignmentscore -
set the minimum alignment score for spliced alignments to be included into the set of spliced alignments default: 0.00
-
-maxalignmentscore -
set the maximum alignment score for spliced alignments to be included into the set of spliced alignments default: 1.00
-
-mincoverage -
set the minimum coverage for spliced alignments to be included into the set of spliced alignments default: 0.00
-
-maxcoverage -
set the maximum coverage for spliced alignments to be included into the set of spliced alignments default: 9999.99
-
-v -
be verbose default: no
-
-gzip -
write gzip compressed output file(s) default: no
-
-bzip2 -
write bzip2 compressed output file(s) default: no
-
-force -
force writing to split files default: no
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
3 releases since Debian 11 (Bullseye); the text changed 2 times.