gt-seed_extend(1) on Linux
The text b0d2680b2c1f, as Debian 10 (Buster) shipped it.
Calculate local alignments using the seed and extend algorithm.
Flags it lists
-
-ani -
-diagband-stat -
-diagbandwidth -
-evalue -
-extendgreedy -
-extendxdrop -
-help -
-ii -
-kmerfile -
-l -
-maxfreq -
-maxmat -
-memlimit -
-mincoverage -
-minidentity -
-no-forward -
-no-reverse -
-outfmt -
-parts -
-qii -
-seedlength -
-spacedseed -
-use-apos -
-v -
-version -
-xdropbelow