gt-readjoiner-overlap1
Compute suffix prefix matches from encoded sequence.
Usage
gt readjoiner
overlap
[option ...]
[file]
Overview
-
-readset [string] -
specify the readset name (default: undefined)
-
-l [value] -
specify the minimum SPM length (default: 0)
-
-parts [value] -
specify the number of parts (default: 0)
-
-memlimit [string] -
specify maximal amount of memory to be used during index construction (in bytes, the keywords MB and GB are allowed) (default: undefined)
-
-v [yes|no] -
be verbose (default: no)
-
-q [yes|no] -
suppress standard output messages (default: no)
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
6 releases since Debian 8 (Jessie); the text changed 5 times.