gt-ltrharvest(1) on Linux
The text 5c9af2359d5e, as Debian 10 (Buster) shipped it.
Predict LTR retrotransposons.
Flags it lists
-
-del -
-gff3 -
-help -
-help+ -
-index -
-ins -
-longoutput -
-mat -
-maxdistltr -
-maxlenltr -
-maxtsd -
-md5 -
-mindistltr -
-minlenltr -
-mintsd -
-mis -
-motif -
-motifmis -
-offset -
-out -
-outinner -
-overlaps -
-scan -
-seed -
-seqids -
-similar -
-tabout -
-v -
-version -
-vic -
-xdrop